Billing codes · ICD-10-CM code

E03.9 hypothyroidism on nutrition claims

The short answerE03.9 is the billable ICD-10-CM code for hypothyroidism, unspecified (it includes myxedema NOS). Use it when the referral says hypothyroidism without a cause. Hashimoto's is E06.3 and hypothyroidism after thyroid surgery or radioactive iodine is E89.0. Payers rarely list hypothyroidism as a covering diagnosis for MNT, so it usually rides second behind obesity, prediabetes or lipid codes.
CodeE03.9
DescriptorHypothyroidism, unspecified (includes myxedema NOS)
BillableYes (FY2026 and FY2027)
HeaderE03 (other hypothyroidism) is not billable
Use instead when documentedE06.3 Hashimoto's/autoimmune; E89.0 postprocedural; E03.2 drug-induced; E03.8 other specified
Common pairingsE66.x + Z68.x, E78.x, R73.03, Z71.3 (payer-dependent)
Medicare MNTDoes not qualify; needs a diabetes or renal diagnosis
FY2027 changeNone to E03 (Oct 1, 2026)

Hypothyroidism is one of the most common conditions listed on a dietitian's intake form and one of the least likely to pay for the visit by itself. It belongs on the claim when the provider documents it. It usually doesn't belong first.

E03.9 and its neighbors

E03.9, hypothyroidism, unspecified, is the default code when the provider writes "hypothyroidism" or "hypothyroid" with no cause. Its one inclusion term is myxedema NOS. E03 itself is a header and rejects if billed.

The category's Excludes1 note takes two causes out of E03 entirely: iodine-deficiency hypothyroidism (E00-E02) and postprocedural hypothyroidism (E89.0). The codes you're most likely to see on referrals:

Documentation Code Notes
Hypothyroidism, no cause stated E03.9 Default
Hashimoto's thyroiditis, autoimmune hypothyroidism E06.3 The index sends "hypothyroidism, autoimmune" here
After thyroidectomy, radioactive iodine or radiation E89.0 Postprocedural hypothyroidism; E03 excludes it
Due to a medication (for example, lithium or amiodarone) E03.2 Hypothyroidism due to medicaments and other exogenous substances
Other specified type E03.8 When the provider names a type without its own code
Congenital E03.0 / E03.1 With or without goiter

Code what the provider wrote. If the referral says "hypothyroidism" and the chart elsewhere says "Hashimoto's," the more specific E06.3 is supported. If you only suspect a cause from the labs, it isn't.

No code in E03, E06.3 or E89.0 changed in the FY2027 update effective October 1, 2026.

Why hypothyroidism rarely carries the claim

Payers decide nutrition coverage by diagnosis, and thyroid codes are seldom on their lists:

The usual reason a hypothyroid patient sees a dietitian is weight, blood sugar or lipids. Those diagnoses carry the claim. E03.9 goes after them and explains the context: slower weight response, medication timing, fatigue affecting activity.

Example claim lines (invented)

Scenario CPT Diagnosis order
UHC member, class 2 obesity and hypothyroidism, 60-minute initial 97802 × 4 A: E66.812, B: Z68.36, C: E03.9
Hashimoto's with mixed hyperlipidemia, 45-minute follow-up 97803 × 3 A: E78.2, B: E06.3
Post-thyroidectomy patient with prediabetes 97803 × 2 A: R73.03, B: E89.0
Medicare, type 2 diabetes and hypothyroidism 97802 × 4 A: E11.9, B: E03.9

Point each service line at the diagnosis that establishes coverage (usually A). A BMI code still needs the provider's weight diagnosis next to it; hypothyroidism doesn't make a Z68 code valid. See E66 obesity codes and E78 hyperlipidemia codes.

What to document

If a referral says only "hypothyroidism, please see for diet," ask the referring office whether weight, lipid or glucose diagnoses should be on it too. A complete referral is cheaper than an appeal. Physician referrals for dietitians covers what to request.

Denials and fixes

What the remit says Usual cause Fix
CO-11 (diagnosis inconsistent with procedure) E03.9 first on a plan that doesn't accept it for MNT Resequence with the covering diagnosis first, if documented
CO-167 (diagnosis not covered) E03.9 as the only diagnosis, or on a Medicare claim Add the documented covering diagnosis; otherwise the visit isn't covered
CO-50 (not medically necessary) Note doesn't show why nutrition therapy treats the condition Appeal with the referral and note, or strengthen documentation going forward
PR-204 (not covered by the plan) Member has no nutrition benefit Patient responsibility; tell them before you bill, and verify before the next visit
Rejected: invalid code E03 billed as a three-character code Bill E03.9 or the specific code

Whether a counseling code should also appear, and where, depends on the payer; see Z71.3. For every diagnosis code on nutrition claims, see the ICD-10 codes for dietitians reference. For how diagnosis order changes which benefit pays, see preventive vs. medical nutrition benefits.

Sources

  1. CMS: ICD-10-CM FY2027 code files and Official Guidelines for Coding and Reporting
  2. CDC NCHS: ICD-10-CM tabular list and addenda
  3. Aetna Clinical Policy Bulletin 0049, Nutritional Counseling
  4. UnitedHealthcare Preventive Care Services, MP.016.59 (effective July 1, 2026)
  5. CMS NCD 180.1, Medical Nutrition Therapy

Sources checked . Payer rules change; verify the member's benefits.

Frequently asked questions

What is the ICD-10 code for hypothyroidism?

E03.9, hypothyroidism, unspecified, when the provider documents hypothyroidism without a cause. More specific codes exist: E06.3 for Hashimoto's (autoimmune) thyroiditis, E89.0 for hypothyroidism after thyroid surgery or radiation, and E03.2 for drug-induced hypothyroidism.

Is Hashimoto's coded as E03.9?

No. The ICD-10-CM index sends autoimmune hypothyroidism to autoimmune thyroiditis, E06.3, and Hashimoto's thyroiditis is an inclusion term there. Code the provider's wording.

Will insurance pay for nutrition counseling for hypothyroidism?

Sometimes, but it's rarely the diagnosis that carries coverage. Preventive MNT lists such as UnitedHealthcare's key on weight, lipid, glucose and blood pressure codes, not thyroid codes. Most claims lead with the weight or metabolic diagnosis and add E03.9 as a secondary code.

Can I bill Medicare MNT for hypothyroidism?

No. Medicare Part B covers MNT for diabetes and renal disease only, with a physician referral. E03.9 can appear as a secondary code on a diabetes claim, but it doesn't qualify the visit.

Did E03.9 change on October 1, 2026?

No. The FY2027 update made no change to category E03.

Part of ICD-10 codes for MNT. Start with ICD-10 Codes for Dietitians: Z71.3, Z68, E66 & More.

Duo Practice

The chart is free. You press Submit.

A free EHR that records the session, writes the note from it, and builds the claim you submit. Billing is 3.9% of what an insurer pays, plus your own Claim.MD plan.

Create free account → No card on file for the EHR